This year we will hold a day practical workshop that will focus on “What and How” of proteomics, structural mass spectrometry, protein-protein interactions and metabolomics. Each topic will cover a diverse array of applications and will provide toolbox for experiment design, sample preparation and data analysis. The workshop is divided into three parallel sessions 1) basic proteomics, 2) advanced computational mass spectrometry, and 3) metabolomics.
The workshop is designed for two diverse type of groups 1) researchers and students that have no or little background in mass spectrometry, 2) researchers that use MS daily but would like to learn more about applications, data analysis and computational methods.
The tentative program
| Time | Session 1 Basic proteomics |
Session 2 Advanced computational mass spectrometry |
Session 3 Metabolomics |
|---|---|---|---|
| 9:10-10:40 | Quantitative proteomics (Rosa Viner, US) | MaxQuant (Tamar Geiger, IL) | experimental setup and metabolite annotation (Ilana Rogachev, IL) |
| 10:40-11:00 | Break | ||
| 11:00-12:30 | Analysis of protein-protein interactions (Yishai Levin, IL) | Integration of Proteomics and Genomic analysis (David Fenyo, US) | how to fit the method to the question? Finding the relevant metabolomics approach (Tamar Avin Wittenberg, IL, Vered Tzin, IL and Max Itkin, IL ) |
| 12:30-13:00 | Lunch | ||
| 13:00-14:30 | Structural mass spectrometry (Nir Kalisman, IL) | Proteomics of unknown genomes (David Morgenstern, IL) | Metabolic Flux Analysis (Eyal Gottlieb, IL) |
| 14:30-15:00 | Break | ||
| 15:00-16:30 | Statistical analysis of proteomic data (hands-on session using Perseus ) (Michal Harel, IL) | Lipidomics (Sergey Malitsky, IL) | |
